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Created with Raphaël 2.2.025Jul2423191715528Jun271914531May2725242322212016141310818Apr171110828Mar2625232221191814131211105428Feb211815141311872131Jan30292824221098729Dec119654330Nov2827262322212011543231Oct3029282524232217122124Sep2019181731Aug24232015976131Jul2724232019171627Jun262523212019181611854131May302524232221161411109854330Apr171410753231Mar29282623211916131297652127Feb2423201716151413111098732131Jan3027252320191817161312111097643225Dec23222019Nov1816151413111098732131Oct302423211711643229Sep2726222120191312231Aug302924232216830Jul28272620191815765430Jun242320181610830May2726252419181716131211107421Apr2016151330Mar2925242322211918171615111098543125Feb242322211817161514111098432131Jan30282726241914131211876517Dec1611109716Nov9865432129OctFollowing the latest changes, this is a general code cleanup in all the classes involved in spatial interpolations. The LIDW method has been commented out since this works very poorly and would need to be properly redone.And now the code that uses the previously upgraded infrastructure in order to compute spatial interpolations using a trend/residuals approach. The tests work, all results should remain identical to what it was before. Lots of now unnecessary code will be removed from the libinterpol2D in the next few days...Moving forward with the trend/residuals approach for the spatial interpolations: here are the necessary changes in the supporting infrastructure: basically, better handling of forced lapse rates and fractional lapse rates, proper toString() methods for the fit1D object and componentsA broken link has been fixed in GRIBIO, the use of inishell is now properly encouraged in the "how to set up your io.ini" section and some indenting in Array1DSince the test input files had been modified for precip, the precip map had to be updated...Big cleanup of the tests: now all ini files are based on io.ini in the root folder of the test (relying on IMPORT) and all use the same copy of forcing data and dem. When meteo_reading fails, it now properly write which fields failed (it was always writing "P").The section prefix is now properly removed for each key when printing a config file (see issue 313)Preparing the way for the new spatial interpolation architecture: the 1D regressions should now offer the necessary features (but this is a first shot at it, it will need to be redone in a more generic way later).A warning has been removed from MathOptim and some comments improvedFixed the license file (issue 309), updated the documentation to include the SIN generator and fixed a wrong commit of the example io.iniCodeBlocks was not happy anymore with << for stringstream. Therefore we now use ostringstream.Oups, the TA grid needed to be regenerated too!The tests had been messed up by the change of the default snow albedo...Adding a link in the documentation, moving libsmet to the plugins subdirectory and small fixes in GRIBIOThe IMPORT feature in Config now works properly on Windows. It is also now possible to call IMPORT_BEFORE from within a section (but it still needs to be the first key in a file). In order to properly import config files while supporting relative paths, it is necessary to internally expand the paths (as well as the symlinks) to check for multiple inclusions, to properly look for a file located relative to another one (instead of related to the execution directory). The IOUtils::cleanPath function has been expanded to support this kind of processing (with a flag to turn it on of off) and a few functions added (getPath, getFilename). The code for Windows has been written but not tested yet. The Posix implementation should also be tested on osx.A description of the data format (not the SNOWPACK requirements, only the data format) has been added to the SNIO documentationThe default ilwr model in Atmosphere as been changed to Unsworth. The fixed snow albedo has been set to 0.85 for all filters/generators using it. The exceptions were not printed with a line return anymore, messing up the display. A function to extract the integral and the fractional part of a double has been added. The julian day number calculation (ie how many days since the begining of the year) was numericaly instable (leading to wrong values in an unpredictable way). A data generator that can generate sinusoidal values (for daily or yearly periods) has been added. The potential radiation generator can now handle missing TA and/or RH (of course, reverting to a very simplistic clear sky model, assuming an average reduced precipitable water).small fixes following a scan by Flawfindermore information in the meteoreading workflow drawingRenaming once more the nearest neighbor algorithm: it is now "nearest". That should be both quick and easy.Updating the example io.iniThis adresses issue 173: now the window_size can be defined per meteo parameter and per resampling algorithm. The Interpolations1D section's syntax has been changed in order to accomodate the change and enable specifying multiple resampling algorithms in the future. An exception is thrown when using the old syntax (until we would consider that everybody should have migrated). The nearest_neighbour algorithm key has been renamed to n_neighbor. Add some extra albedo calculations strategies (for some border cases)In order to avoid re-parsing the resampling parameters for every point, the resampling algorithms have been restructured as classes inheriting from an interface class alongside an object factory. This should slightly increase the performances of resampling and clears the way (90% of the work being done) for a per-parameter window size (issue 173).The Unsworth parametrization for ILWR has been fixed and now works as data generator. Some comments have been added to Sun.cc.The graphical message box for exceptions has been turned off by default, because it was interfering with cdash. Packagers are therefore invited to turn it ON for public packages (since this tends to make users read the error messages).fixing some warnings on HeraThe DataGenerators handling of missing meteo fields has been changed: if a generator is defined for a field that is not found in the vecMeteo, it will silently be skipped.The dataGenerators can now process all parameters (ie including the extra parameters) properly. This makes it possible to create a new parameter by using a COPY followed by *0, +nodata filters and then fill the now empty new parameter with a data generator (very useful to compare generated values with a reference measurement). Moreover the processing overhead should have been reduced by looping over the declared generators instead of over the parameters.HACK: No message boxes on OSX either.HACK: MessageBox should not appear without the user wanting it -> create a parameter in ini The == and != operators have been added to the arrays (easier for debugging). Array4D was not included in MeteoIO.h and has been added.The meteo reading workflow diagram has been expanded to show where a user can participate and what he can useSince correcting the Corripio slope algorithm changed the spatial interpolations that were based on slopes, it was necessary to regenerate the reference for the HNW gridA typo had slipped through the last commit for Array4D. The Corripio slope computation was till wrong, this has finally been fixed and checked. The slope default algorithm selection was not kept through BufferedIOHandler, this has been fixed. Moreover, unecessary copies of grids were being made in BufferedIOHandler and have been removed. The tests that were not passing anymore because of the slope changes have been updated, including improved error reporting in dem_reading.Removed an unnecessary include and fixed the Corripio slope algorithm that was not properly implemented (following the paper, it was not centered on the cell. It has been rewritten to be centered).Trying to help the compiler use SIMD instructions for some array operations. Small documentation improvement for IMISIO.The >> operator was not 100% properly implemented...