/***********************************************************************************/
/*  Copyright 2009-2015 WSL Institute for Snow and Avalanche Research    SLF-DAVOS      */
/***********************************************************************************/
/* This file is part of Alpine3D.
    Alpine3D is free software: you can redistribute it and/or modify
    it under the terms of the GNU Lesser General Public License as published by
    the Free Software Foundation, either version 3 of the License, or
    (at your option) any later version.

    Alpine3D is distributed in the hope that it will be useful,
    but WITHOUT ANY WARRANTY; without even the implied warranty of
    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
    GNU Lesser General Public License for more details.

    You should have received a copy of the GNU Lesser General Public License
    along with Alpine3D.  If not, see <http://www.gnu.org/licenses/>.
*/
#include <alpine3d/ebalance/TerrainRadiationHelbig.h>

#include <cstdio>
#include <algorithm>

#pragma GCC diagnostic push
#pragma GCC diagnostic ignored "-Weffc++"

using namespace mio;
using namespace std;

TerrainRadiationHelbig::TerrainRadiationHelbig(const mio::Config& cfg, const mio::DEMObject& dem_in, const int&, const std::string& method)
	: TerrainRadiationAlgorithm(method), dem(dem_in), dimx(dem.getNx()), dimy(dem.getNy()), cellsize(dem.cellsize), viewFactorsHelbigObj(cfg, dem_in),
	  viewSectorFactorsObj(cfg, dem_in), viewFactorsClusterObj(cfg, dem_in), lwt_byCell(dimx*dimy)
{
	double lw_radius;
	cfg.getValue("itEps_SW", "EBalance", itEps_SW );
	cfg.getValue("itEps_LW", "EBalance", itEps_LW );
	cfg.getValue("itEps1_SW", "EBalance", itEps1_SW);
	cfg.getValue("sw_radius", "EBalance", sw_radius);
	cfg.getValue("lw_radius", "EBalance", lw_radius);

	total_diff.resize( dimx, dimy );
	tdir.resize( dimx, dimy );
	tdiff.resize( dimx, dimy );
	sw_t.resize( dimx, dimy );
	glob_start.resize( dimx, dimy );
	glob_h_isovf.resize( dimx, dimy );
	glob_h.resize( dimx, dimy );
	t_snowold.resize( dimx, dimy );
  total_terrain.resize( dimx, dimy );

	lw_t.resize( dimx, dimy );
	lwi.resize( dimx, dimy );
	lw_sky.resize( dimx, dimy );

	LW_distance_index = (int)ceil(lw_radius / cellsize);

  bool write_sky_vf=false;
  cfg.getValue("WRITE_SKY_VIEW_FACTOR", "output", write_sky_vf,IOUtils::nothrow);

  if(MPIControl::instance().master() && write_sky_vf){
    std::cout << "[i] Writing sky view factor grid" << std::endl;
    mio::Array2D<double> sky_vf(dimx,dimy);
    getSkyViewFactor(sky_vf);
    mio::IOManager io(cfg);
    io.write2DGrid(mio::Grid2DObject(dem_in.cellsize,dem_in.llcorner,sky_vf), "SKY_VIEW_FACTOR");
  }
}

void TerrainRadiationHelbig::getRadiation(const mio::Array2D<double>& direct, mio::Array2D<double>& diffuse,
                                          mio::Array2D<double>& terrain, mio::Array2D<double>&
                                          direct_unshaded_horizontal, mio::Array2D<double>& view_factor,
                                          double solarAzimuth, double solarElevation)
{
		std::cout << "[i] calc nora radiation" << std::endl;
		tdir = direct;
		tdiff = diffuse;
		Compute();
		terrain = total_terrain;
    diffuse=tdiff;
    getSkyViewFactor(view_factor);
}

void TerrainRadiationHelbig::getSkyViewFactor(mio::Array2D<double> &o_sky_vf) {
	viewFactorsHelbigObj.getSkyViewFactor(o_sky_vf);
}

void TerrainRadiationHelbig::setMeteo(const mio::Array2D<double> &albedo,const mio::Array2D<double> &ta,const mio::Array2D<double> &rh,const mio::Array2D<double> &ilwr)
{
		meteo2d_ta = ta;
		meteo2d_rh = rh;
		meteo2d_ilwr = ilwr;
		albedo_grid = albedo;
		max_alb = albedo_grid.getMax();
}

void TerrainRadiationHelbig::Compute()
{	//we take sn_MdataT values as reference radiation values for all cells
	//iswr_ref = sn_MdataT.iswr;
	//ea_ref = sn_MdataT.ea;
	//WORKAROUND
	//ea_ref = 100;
	//FillSurfaceData ( );
	// the  distributed radiation  calculation
	//double solarElevation;

	ComputeRadiationBalance();

	//sn_MdataT.elev = solarElevation; //needed for Canopy
	// Fill shortwave, longwave, total diffuse shortwave and solar elevation into
	// corresponding snowpack data structure
}

int TerrainRadiationHelbig::SWTerrainRadiationStep(const double threshold_itEps_SW, int& i_max_unshoot, int& j_max_unshoot, unsigned int n, const clock_t t0)
{
	// Computation of shortwave terrain radiation
	// At every iteration step, a reference grid cell reflects ('shoots') radiation to every other grid cell
	// The coordinates of the next cell with the most unshoot radiation is writen in (*c,*d)
	const int i_shoot = i_max_unshoot, j_shoot = j_max_unshoot;	//variables for the grid cell with the most unshot radiation
	double diffmax_sw=0.;		// reference product for detecting the grid cell with most unshot shortwave radiation
	const double diffmax_thres=0.;	// threshold for when to stop looking for maximum cells
	double eps_stern=0.;		// stopping criterion
	double be=0.;			// matrix difference B^(k) - E resp. (L_sky + L_terrain) - L_sky
	unsigned int s=0;			// counts gathering patches, i.e. those patches within limited distance radius

	//variable needed to optimize the computational speed
	const double sw_radius2 = sw_radius * sw_radius;
	const double z_shoot=dem.grid2D(i_shoot,j_shoot);
	const double sw_shoot = sw_t(i_shoot,j_shoot);

	// every grid cell ij receives radiation from the chosen one with coordinates ab
	for ( int j = 0; j < dimy; j++ ) {
		for ( int i = 0; i < dimx; i++ ) {
			const double bx = (i_shoot - i) * cellsize;	// bx = dx (m) going from (i_shoot,j_shoot) to (i,j)
			const double by = (j_shoot - j) * cellsize;	// by = dy (m) going from (i_shoot,j_shoot) to (i,j)
			const double bz = z_shoot - dem.grid2D(i,j);	// bz = dz (m) going from (i_shoot,j_shoot) to (i,j)

			// distance between the surfaces
			const double dist2 = ( (bx * bx) + (by * by) + (bz * bz) );

			//available radiation to reflect at the current cell
			const double reflected_i_j = viewFactorsHelbigObj.getSymetricTerrainViewFactor(i,j) * sw_t(i,j);

			// the shortwave radiation will only be emitted if the radius is lower than
			// a preassumed radius (sw_radius) -> changeable in: sw_t(a,b) * sw_radius
			//please note that it also excludes the current shooting cell itself!

			if ( dist2 <= sw_radius2 && dist2>0.) {

				const double viewFactor = viewFactorsHelbigObj.GetViewfactor(i, j, i_shoot, j_shoot);
                                //const double viewFactor = viewSectorFactorsObj.GetViewfactor(i, j, i_shoot, j_shoot);

				// calculation of the reflected amount of radiation of ab that arrives at ij
				const double rad = viewFactor * albedo_grid(i,j) * sw_shoot;

				// the received amount is added to the reflectable amount of radiation (unshot)
				sw_t(i,j) += rad;
				// in addition the received amount is added to the total radiation at ij
				glob_h(i,j) += rad;
				total_terrain(i,j) += viewFactor * sw_shoot;

				s++;
			} // end of if only for distances lower than sw_radius

			// the next ('shooting') grid cell with the most unshot radiation is selected
			// taking into account albedo, actual (slope) area size, reflected shortwave
			// radiation and the sum of total terrain view factor
			if ( reflected_i_j  > diffmax_sw ) {
				if (i!=i_shoot && j!=j_shoot) {
					diffmax_sw = reflected_i_j;
					i_max_unshoot = i;
					j_max_unshoot = j;
				}
			}

			// the first stopping criterion:
			// |Delta B^(k) * Sum_j(Fij) * A|_1
			eps_stern += fabs( reflected_i_j );

			// the second stopping criterion:
			// |B^(k) - E|_1
			be += fabs(glob_h(i,j) - glob_start(i,j));

		} // end of for i loop
	} // end of for j loop

	// set the reflected 'shot' radiation at that cell to zero
	sw_t(i_shoot,j_shoot) = 0.;

	// check for stopping the iteration
	if ( eps_stern <= threshold_itEps_SW || be >= (itEps1_SW *
		     ( mean_glob_start * dimx * dimy )) || diffmax_sw<=diffmax_thres) {
		printf("[i] EBALANCE: SW converged after n=%u steps eps_stern <= %2.10f be <= %2.10f with %u gathering steps\n", n, eps_stern, be, s);
		printf("    time for SW %f seconds\n", (double)((clock() - t0)/CLOCKS_PER_SEC));
		fflush( stdout );
		return 1;
	}

	return 0;
}


int TerrainRadiationHelbig::LWTerrainRadiationStep(const double threshold_itEps_LW, const int itMax_LW,
						const int i_shoot, const int j_shoot, unsigned int n, const clock_t t0)
{
// Computation of longwave terrain radiation. NOTE: This function takes up a lot of computational time globally!
// At every iteration step, one reference grid cell (*e,*f) reflects ('shoots') radiation to every other grid cell
// within a given distance (LW_distance_index in cells units). Every grid cell is only once the emitting cell (no multiple reflections)

//Optimizations by GS (see report for more details)
// inlines functions have been created to calculate radiation, distance and next shooting cell
// each shooting cell is only processed within a square around it (within LW_distance_index)
// #6.4 calculate the distance only when the view-factor is different from 0
// #6.5 use pointers to access Array2D elements
// We now use an array to find the next shooting cell

	const double diffmax_thresh=0.;		//when do we consider that the contributions are too small -> stop this iteration?
	//const unsigned int ab = i_shoot + j_shoot*dimx;	//1D addressing of the shooting cell for the view factors matrix
	int s = 0;				//counts gathering patches, i.e. those patches within limited distance radius

	// variables needed to optimize the computational speed
	const double z_shoot=dem.grid2D(i_shoot,j_shoot);
	const double t_snow_shoot=t_snowold(i_shoot,j_shoot);
	const double t_snow_shoot_value=0.0001452 * t_snow_shoot- 0.0304;

	//Optimisation #6 by GS : Calculation of max/min indice
	int distance_min_x, distance_max_x, distance_min_y, distance_max_y;
	CalculateIndex(i_shoot, LW_distance_index, dimx, &distance_min_x, &distance_max_x);
	CalculateIndex(j_shoot, LW_distance_index, dimy, &distance_min_y, &distance_max_y);

	//Optimisation #7 : Calculations to unroll loop
	const int rest_itr = (distance_max_y - distance_min_y) % NB_UNROLL; //leftover iterations after unrolling
	const int nb_itr = (distance_max_y - distance_min_y) - rest_itr; //iterations processed in the unrolling

	if ( viewFactorsHelbigObj.vf_in_ram ) {	//view factors are stored, we use them directly
		//Optimisation #3.1 by GS : precompute the invariant of the two loops
		int i = distance_min_x;
		for ( ; i <= distance_max_x; i++ ) {
			//Optimisation #3.1 by GS: precompute the invariant of the loop
			const double bx = (double)(i_shoot - i) * cellsize; // bx = dx (m) going from (i_shoot,j_shoot) to (i,j)
			const double bx2 = bx*bx;

			//Optimization #6.5 by GS: Create pointers to table elements
			//WARNING: this assumes that the element are stored in consecutive locations
			double *pt_ta = (double *)(&meteo2d_ta(i, distance_min_y));
			double *pt_lwi = (double *)(&lwi(i,distance_min_y));
			double *pt_z = (double *)(&dem.grid2D(i,distance_min_y));

			//Optimisation #7.1 by GS: unrolling loops 8x
			int j = distance_min_y;
			for ( ; j < nb_itr; j+=3) {
				//const unsigned int ij_0 = j * dimx + i;
				//const unsigned int ij_1 = (j+1) * dimx + i;
				//const unsigned int ij_2 = (j+2) * dimx + i;

				const double sx_0 = dem.Nx(i,j);
				const double sx_1 = dem.Nx(i,j+1);
				const double sx_2 = dem.Nx(i,j+2);

				const double sy_0 = dem.Ny(i,j);
				const double sy_1 = dem.Ny(i,j+1);
				const double sy_2 = dem.Ny(i,j+2);

				double vf_0 = viewFactorsHelbigObj.GetViewfactor(i,j,i_shoot,j_shoot);
				double vf_1 = viewFactorsHelbigObj.GetViewfactor(i,j+1,i_shoot,j_shoot);
				double vf_2 = viewFactorsHelbigObj.GetViewfactor(i,j+1,i_shoot,j_shoot);

				//view factor is symetric part (from vf() ) divided by the "area" of the current cell
				vf_0 /= ( sqrt( sx_0*sx_0 + sy_0*sy_0 + 1. ) * cellsize * cellsize );
				vf_1 /= ( sqrt( sx_1*sx_1 + sy_1*sy_1 + 1. ) * cellsize * cellsize );
				vf_2 /= ( sqrt( sx_2*sx_2 + sy_2*sy_2 + 1. ) * cellsize * cellsize );

				LWTerrainRadiationCore(bx2, j_shoot, z_shoot, j, *pt_z, cellsize, t_snow_shoot, t_snow_shoot_value, *pt_ta, vf_0, &(*pt_lwi), &s);
				pt_z++;
				pt_ta++;
				pt_lwi++;
				LWTerrainRadiationCore(bx2, j_shoot, z_shoot, j+1, *pt_z, cellsize, t_snow_shoot, t_snow_shoot_value, *pt_ta, vf_1, &(*pt_lwi), &s);
				pt_z++;
				pt_ta++;
				pt_lwi++;
				LWTerrainRadiationCore(bx2, j_shoot, z_shoot, j+2, *pt_z, cellsize, t_snow_shoot, t_snow_shoot_value, *pt_ta, vf_2, &(*pt_lwi), &s);
				pt_z++;
				pt_ta++;
				pt_lwi++;

			} // end of for j unrolled loop

			//Optimisation #7.1 by GS : Do the rest of unrolled loop
			for ( ; j <= distance_max_y; j++ ) {
				/*const int ij = j * dimx + i;*/

				//Optimisation #3.2 by GS
				//Use a variable to replace vf[0][0]
				//const double tmp_vf = vf(ij,ab);
				const double tmp_vf = viewFactorsHelbigObj.GetViewfactor(i, j, i_shoot, j_shoot);
				LWTerrainRadiationCore(bx2, j_shoot, z_shoot, j, *pt_z, cellsize, t_snow_shoot, t_snow_shoot_value, *pt_ta, tmp_vf, &(*pt_lwi), &s);
				pt_z++;
				pt_ta++;
				pt_lwi++;

			} // end of for j loop
		} // end of for i loop
	} else {		//view factors are not stored, they are calculated on the fly
		int i = distance_min_x;
		for ( ; i < distance_max_x; i++ ) {
			//Optimisation #3.1 by GS
			//Output the invariant of the loop
			const double bx = (double)(i_shoot - i) * cellsize;           // bx = dx (m) going from (i_shoot,j_shoot) to (i,j)
			const double bx2 = bx*bx;

			//Create pointers to O #6.5
			double * pt_ta = (double *)(&meteo2d_ta(i,distance_min_y));
			double * pt_lwi = (double *)(&lwi(i,distance_min_y));
			double * pt_z = (double *)(&dem.grid2D(i,distance_min_y));

			int j = distance_min_y;
			for ( ; j < nb_itr; j+=NB_UNROLL ) {
				double viewFactor;
				/*vf(0,0) = 0.; //our value will be stored in vf[0][0]
				ComputeHorizon (solar_elev, i, j, i_shoot, j_shoot);*/
				viewFactor = viewFactorsHelbigObj.GetViewfactor(i, j, i_shoot, j_shoot);
				LWTerrainRadiationCore(bx2, j_shoot, z_shoot, j, *pt_z, cellsize, t_snow_shoot, t_snow_shoot_value, *pt_ta, viewFactor,&(*pt_lwi), &s);
				pt_z++;
				pt_ta++;
				pt_lwi++;

				/*vf(0,0) = 0.;
				ComputeHorizon (solar_elev, i, j+1, i_shoot, j_shoot);*/
				viewFactor = viewFactorsHelbigObj.GetViewfactor(i, j+1, i_shoot, j_shoot);
				LWTerrainRadiationCore(bx2, j_shoot, z_shoot, j+1, *pt_z, cellsize, t_snow_shoot, t_snow_shoot_value, *pt_ta, viewFactor, &(*pt_lwi), &s);
				pt_z++;
				pt_ta++;
				pt_lwi++;

				/*vf(0,0) = 0.;
				ComputeHorizon (solar_elev, i, j+2, i_shoot, j_shoot);*/
				viewFactor = viewFactorsHelbigObj.GetViewfactor(i, j+2, i_shoot, j_shoot);
				LWTerrainRadiationCore(bx2, j_shoot, z_shoot, j+2, *pt_z, cellsize, t_snow_shoot, t_snow_shoot_value, *pt_ta, viewFactor, &(*pt_lwi), &s);
				pt_z++;
				pt_ta++;
				pt_lwi++;

			} // end of for j unrolled loop

			//Optimisation #7.1 by GS : Do the rest of unrolled loop
			for ( ; j <= distance_max_y; j++ ) {
				/*vf(0,0) = 0.;
				ComputeHorizon (solar_elev, i, j, i_shoot, j_shoot);*/
				const double viewFactor = viewFactorsHelbigObj.GetViewfactor(i, j, i_shoot, j_shoot);
				LWTerrainRadiationCore(bx2, j_shoot, z_shoot, j, *pt_z, cellsize, t_snow_shoot, t_snow_shoot_value, *pt_ta, viewFactor, &(*pt_lwi), &s);
				pt_z++;
				pt_ta++;
				pt_lwi++;
			} // end of for j loop
		} // end of for i loop
	} //end of stored/unstored view factors test

	//compute emitted radiation that will be used for the convergence criteria
	const double local_radiation = viewFactorsHelbigObj.getSymetricTerrainViewFactor(i_shoot, j_shoot) * lw_t(i_shoot, j_shoot);

	// set the emitted 'shot' radiation at that cell to zero, but in contrast to the
	// shortwave radiation exchange taking into account multiple reflections here
	// every grid cell emitts only once
	lw_t(i_shoot,j_shoot) = 0.;

	// check for stopping the iteration: physical threshold OR too many iterations OR no more cell that can emit left
	if ( lw_eps_stern <= threshold_itEps_LW || ((int)n >= itMax_LW) || local_radiation<=diffmax_thresh) {
		printf( "day with PR: LW converged after n %u steps error %2.10f with %u gathering patches\n",
				n, lw_eps_stern, s);
		printf(" time for LW %f seconds\n", (double)((clock() - t0) / CLOCKS_PER_SEC) );
		fflush( stdout );
		return 1;
	}
	return 0;
}

void TerrainRadiationHelbig::ComputeTerrainRadiation ( const bool& day, int i_max_unshoot, int j_max_unshoot )
{
// computes long wave and short wave terrain radiation using
// a Progressive Refinement Radiosity (e.g. Gortler et al. (1994)
// view factors are either stored or computed on the fly (according to vf_in_ram)
	unsigned int n;				// counts iteration steps
	double threshold_itEps_SW;	// stopping threshold for SW PR iteration
	double threshold_itEps_LW;	// stopping threshold for LW PR iteration
	int itMax_LW;			// maximum number of iteration steps for longwave emission
	int converged = 0;			// 0 until iterated solution reaches a certain accuracy
	clock_t t0;

	//computing SW terrain radiation
	if (day==true) { //We compute SWR terrain radiation only during the day
		n = 0;	// iteration step counter
		t0 = clock();

		//limits redundant terrain radiation computation to a maximum
		//reflectable direct + diffuse sky of 40 W/m2 and albedo of 0.99
		if ( max_glob_start < 40. )
			converged = 1;
		else
			converged = 0;
		// itEps_SW: SW radiosity stopping tolerance
		// epsilon = itEps_SW * |unshot radiosity|_1 sum / faktor y
		threshold_itEps_SW = itEps_SW * (mean_glob_start * dimx * dimy) * viewFactorsHelbigObj.min_area
                          * viewFactorsHelbigObj.min_vterr * (1. - max_alb) / max_alb;

		mio::Timer timer_sw;
		timer_sw.start();
		//HACK: do computation on square, as for LW
		std::cout << "converged: " << converged << std::endl;
		while (converged != 1) {
			n++;
			converged = SWTerrainRadiationStep(threshold_itEps_SW, i_max_unshoot, j_max_unshoot, n, t0);
		}

		timer_sw.stop();
		std::cout << "calc sw radiation: " << timer_sw.getElapsed() << std::endl;
	}

	//computing LW terrain radiation
	t0 = clock();
	// itEps_LW: LW radiosity stopping tolerance
	threshold_itEps_LW = itEps_LW * lw_start_l1 * viewFactorsHelbigObj.min_area * viewFactorsHelbigObj.min_vterr;

	// maximum number of iteration steps for longwave emission is limited to the number of
	// grid cells per model domain
	itMax_LW = dimx * dimy;


  //---> Block to uncomment to put back LW
	//converged = 0;
	//n = 0;	// iteration step counter = shooting cell counter
	//while (converged != 1) {
	//	n++;
	//	converged = LWTerrainRadiationStep(threshold_itEps_LW, itMax_LW, lwt_byCell[n].x, lwt_byCell[n].y, n, t0);
	//	lw_eps_stern -= fabs(lwt_byCell[n-1].radiation); //updating convergence criteria
	//}


} // end of ComputeTerrainRadiation


void TerrainRadiationHelbig::ComputeRadiationBalance ()
{ // This routine computes the distributed radiation balance
	//double corr_dir;		// correction parameter for the distributed theoretical direct radiation
	bool day;			// switch for daytime / nighttime
	int i_max_unshoot = 0, j_max_unshoot = 0;		// variables for the grid cell with the most unshot shortwave radiation
	//double solarAzimuth;
	//double toa_h, direct_h, diffuse;

	//calculate atmosphere parameters at the station
	if ( tdir.getMax() + tdiff.getMax() > 0 )
		day=true;
	else
		day=false;

	// in case of usage of cloud cover as input the emissivity has to be converted in eighth
	//if (CLOUD==1) ea_ref = ea_ref/8.;

	// maximum of reflectable direct and diffuse sky shortwave radiation
	max_glob_start = 0.;
	// mean of reflectable direct and diffuse sky shortwave radiation
	mean_glob_start = 0.;
	// emittable longwave start distribution with vector norm l1
	lw_start_l1 = 0.;

	// calculation of the reflected radiation from the terrain
	InitializeTerrainRadiation(day, i_max_unshoot, j_max_unshoot);
  ComputeTerrainRadiation( day, i_max_unshoot, j_max_unshoot );

	fillSWResultsGrids(day);
}

void TerrainRadiationHelbig::InitializeTerrainSwSplitting(const int i, const int j,
                                                 int& i_max_unshoot, int& j_max_unshoot, double& diffmax_sw)
{

  // Correct diffuse for sky VF
	tdiff(i,j) = tdiff(i,j)*viewFactorsHelbigObj.getSkyViewFactor(i,j); //no reprojection for diffuse rad

	// local *reflected* direct and diffuse sky radiation (later glob_h will include terrain reflected radiation)
	glob_h(i,j) = albedo_grid(i,j) * (tdir(i,j) + tdiff(i,j)); //HACK: despite its name, it is on the slope, not horizontal!

	// storing the start shortwave radiation distribution
	glob_start(i,j) = glob_h(i,j);

	// computing the mean reflectable start shortwave radiation distribution
	mean_glob_start += fabs( glob_start(i,j) )/ (dimx * dimy);

	// the possibly reflected shortwave radiation at the beginning
	sw_t(i,j) = glob_h(i,j);

	// the grid cell with the most unshot radiation is selected taking into account albedo,
	// actual (slope) area size, reflected shortwave radiation and sum of total terrain view factor
	if ( sw_t(i,j) * viewFactorsHelbigObj.getSymetricTerrainViewFactor(i,j)  > diffmax_sw ) {
		diffmax_sw = sw_t(i,j) * viewFactorsHelbigObj.getSymetricTerrainViewFactor(i,j);
		i_max_unshoot = i;
		j_max_unshoot = j;
	}

	// lower bound for iteration start:
	// no reflected SW terrain radiation needs to be accounted for if not a patch exists
	// with max_glob_start > 40 Wm2 and a view factor sum of > 0.1 (prevents to take mountain peaks)
	//std::cout << sw_t(i,j) << " " <<  max_glob_start << " " << viewFactorsHelbigObj.getSymetricTerrainViewFactor(i,j) << std::endl;
	if ( sw_t(i,j) > max_glob_start && viewFactorsHelbigObj.getSymetricTerrainViewFactor(i,j) > 0.1 ) {
		max_glob_start = sw_t(i,j);
	}
}

void TerrainRadiationHelbig::InitializeTerrainRadiation(const bool& day, int& i_max_unshoot, int& j_max_unshoot)
{
	double diffmax_sw = 0.; // reference product for detecting the grid cell with most unshot shortwave radiation
	//int horizon_x, horizon_y; // corresponding horizon coordinates in solar azimuth direction

  total_terrain.resize(dimx, dimy, 0);

	lw_eps_stern = 0.; //Stop criterion for the LW terrain radiation

	for ( int i = 0; i < dimx; i++ ) {
		for ( int j = 0; j < dimy; j++ ) {
      total_terrain(i,j) = 0;
			if (dem.grid2D(i,j)==mio::IOUtils::nodata) continue;

			if (day==true) { //then, compute short wave radiation
				//set initial values for each cell for SW diff (view caftor correction)
				InitializeTerrainSwSplitting(i, j, i_max_unshoot, j_max_unshoot, diffmax_sw);
			}
			//compute long wave radiation
			// saturation vapor pressure in Pa (routine in snowpack)
			//const double e_stern = mio::Atmosphere::vaporSaturationPressure( meteo2d_ta(i,j) );
			// wvp = water vapor pressure
			//const double wvp = meteo2d_rh(i,j) * e_stern;
			//Long Wave initialization

			//InitializeLW(i, j); ---> TO PUT BACK ?
		}
	}

	//Optimisation by GS #6 : Sort array by emitted LW radiation
	//if (TERRAIN_RADIATION!=0)
	//qsort(lwt_byCell, dimx*dimy, sizeof(CellsList), CellsRadComparator_Helbig );
	sort(lwt_byCell.begin(), lwt_byCell.end(), operator_greater);
}

//Function to calculate the min/max index around a given cell, knowing a given radius in cell units
void TerrainRadiationHelbig::CalculateIndex(const int indice, const int distance_max, int dim, int * min, int * max)
{
	int i_max = indice+distance_max;
	int i_min = indice-distance_max;

	if (i_max >= dim) {
		*max = dim-1;
	} else {
		*max = i_max;
	}
	if (i_min < 0) {
		*min = 0;
	} else {
		*min = i_min;
	}
}

//Function to calculate radiation transmit by base cell to other cell and add them in the radiation received by the other cell
//Calculate also gathering patches
void TerrainRadiationHelbig::LWTerrainRadiationCore(const double bx2, const int j_shoot, const double z_shoot, const int j, const double z, const double cellsize, const double t_snow_shoot,const double t_snow_shoot_value ,const double t_a, const double vf, double * lwi, int * s)
{
// formulation of the long-wave radiation coming from the terrain:
// Model runs of Sebastian Hoch with MODTRAN4 to check out at what distances are terrain patches
// seen still important; it is on one hand depending on the surface temperature of a specific patch
// and on the other hand on the surface properties, respectively the albedo (?).
// afterwards empirical formulation of Michi Lehning using R
// the formulation gives LW in W / (m2 * sr)
// as the view factor is for emitting in the hemisphere (divided by PI in the view factor formula)
// we here have to multiply by PI

	//Optimisation #4 by GS
	//Calculation of radiation only if vf != 0
	if (vf != 0.0){
		const double by = (double)(j_shoot - j) * cellsize;	// by = dy (m) going from (i_shoot,j_shoot) to (i,j)
		const double bz = z_shoot - z;				// bz = dz (m) going from (i_shoot,j_shoot) to (i,j)
		const double dist2 = ( bx2 + (by * by) + (bz * bz) );

		/*
		const double rad = ( 0.000009886 * (pow( 0.5 * log(dist2),1.07 )) * (t_a - t_snow_shoot)
		+ 0.000003456 * t_a + 0.0001452 * t_snow_shoot - 0.0304 )
		* vf * 10000. * PI;
		*/

		//Optimisation #3.3
		//Precalculation of some parts
		const double rad = vf * ( 4.7088896243311818e-06*pow(log(dist2),1.07) * (t_a - t_snow_shoot)
		+ 0.000003456 * t_a + t_snow_shoot_value ) * M_PI * 10000;

		// the received amount is added to the total radiation at ij
		(*lwi) += rad;
		(*s)++;
	}
}

void TerrainRadiationHelbig::fillSWResultsGrids(const bool& day) {
	if (day==true) {
		//double sumrad_o = 0; // total outgoing radiation to compute effective albedos
		//double sumrad_i = 0; // total incoming radiation to compute effective albedos
		for ( int i = 0; i < dimx; i++ ) {
			for ( int j = 0; j < dimy; j++ ) {
				if (dem.grid2D(i,j)==mio::IOUtils::nodata) continue;
				// Compute the effective albedo of the model domain
				//sumrad_i += glob_start(i,j) / meteo2D(i,j).alb;
				//sumrad_o += glob_h(i,j) * sky_vf(i,j);

				// Fill in the return values for SNOWPACK or for the ebalance OUTPUT
				// the INCIDENT global shortwave radiation:
				if (albedo_grid(i,j) > 0)
          glob_h(i,j) = glob_h(i,j) / albedo_grid(i,j); //HACK: this is BAD!
				// TOTAL incident shortwave diffuse radiation
				//std::cout << tdiff(i,j) << " " << glob_h(i,j) << " " << glob_start(i,j) << " " << albedo_grid(i,j) << std::endl;
				if (albedo_grid(i,j) > 0)
          total_diff(i,j) = tdiff(i,j) + glob_h(i,j) - (glob_start(i,j) / albedo_grid(i,j));
			}
		}
	} else {
		for ( int i = 0; i < dimx; i++ ) {
			for ( int j = 0; j < dimy; j++ ) {
				if (dem.grid2D(i,j)==mio::IOUtils::nodata) continue;
				glob_h(i,j) = 0.;
				total_diff(i,j) = 0.;
			}
		}
	}
}

void TerrainRadiationHelbig::InitializeLW (const int i, const int j)
{
	// longwave sky radiation calculation
	//lw_sky(i,j) = SkyLW (wvp, meteo2D(i,j).ta, sky_vf(i,j), ea_ref); //read cloud cover input from MeteoIO?!
	lw_sky(i,j) = meteo2d_ilwr(i,j)*viewFactorsHelbigObj.getSkyViewFactor(i,j);
	lwi(i,j) = lw_sky(i,j);

	// longwave radiation of ij emittable to the surrounding terrain without attenuation and view factor
	const double tss = t_snowold(i,j);
	lw_t(i,j) = Cst::stefan_boltzmann * (tss*tss*tss*tss);

	// computing the longwave emission start distribution with l1 vector norm
	lw_start_l1 += fabs( lw_t(i,j) );

	// the grid cell with the most unshot radiation is selected taking into account an air column reduction factor,
	// the actual (slope) area size, emittable longwave radiation and sum of total terrain view factor
	const double rad_t = viewFactorsHelbigObj.getSymetricTerrainViewFactor(i,j) * lw_t(i,j);

	//Optmisation #6 by GS : put the current element in the table of LW TerrainRadiation
	//if (TERRAIN_RADIATION!=0) {
		CellsList& lwtrbc = lwt_byCell[i*dimy+j]; //temporary reference to the current element's location
		lwtrbc.radiation = rad_t;
		lwtrbc.x = i;
		lwtrbc.y = j;
	//}

	lw_eps_stern += fabs(rad_t);
}

#pragma GCC diagnostic pop
